Difference between revisions of "Journal Club"

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==Schedule <nowiki>*</nowiki>subject to change<nowiki>*</nowiki>==
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==Schedule==
  
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At 3:00pm on Wednesdays, using [https://washington.zoom.us/j/93342869302]:
  
September 19, 2014- Abhi (Lit)
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Feb 3 - video journal club: [https://youtu.be/gqHUiULsc3E?t=11m42s Michael Woodside, U Alberta]
  
[http://www.nature.com/nature/journal/v472/n7342/pdf/nature09873.pdf Amyloid-binding compounds maintain protein homeostasis during ageing and extend lifespan], [http://www.nature.com/nature/journal/v472/n7342/extref/nature09873-s1.pdf SI]
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Feb 10 - video journal club, TBD
  
October 2, 2014- David (Data)
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Feb 17 - Ellie data/practice talk
  
October 9, 2014- Shay (Lit)
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Feb 24 - Hayli practice talk
  
October 23, 2014- Eri (Data)
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Mar 3 - Eleanor practice talk
  
October 30, 2014- Hannah (Lit)
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Mar 10 - video journal club, TBD
  
November 13, 2014- David (Lit- practice talk)
 
  
November 20, 2014- Hannah (Data)
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==[[Past Journal Clubs]]==
 
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December 4, 2014- Eri (Lit)
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==Past Journal Clubs==
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===August 21, 2014===
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Eri -  [http://marvin.mchem.washington.edu/wiki/images/f/f8/2008_Xue_Radford.pdf/ Systematic Analysis of Nucleation-Dependent Polymerization Reveals New Insights into the Mechanism of Amyloid Self-Assembly]
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===Jul 31, 2014===
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Hannah - [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2739042/ The Amino Terminus of Tau Inhibits Kinesin-Dependent Axonal Transport: Implications for Filament Toxicity]
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::[http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3704193/ Tau oligomers and tau toxicity in neurodegenerative disease]
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===Jul 10, 2014===
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Abhi - [http://pubs.acs.org/doi/full/10.1021/ja2017703 Metastability of Native Proteins and the Phenomenon of Amyloid Formation]; [http://pubs.acs.org/doi/suppl/10.1021/ja2017703/suppl_file/ja2017703_si_001.pdf SI]
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::[http://www.sciencemag.org/content/325/5938/328.full Functional Amyloids As Natural Storage of Peptide Hormones in Pituitary Secretory Granules]; [http://www.sciencemag.org/content/suppl/2009/07/02/1173155.DC1/Maji.SOM.pdf SI]
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===May 29, 2014===
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Hannah - [http://www.cell.com/biophysj/abstract/S0006-3495(14)00271-9 Conformational Recognition of an Intrinsically Disordered Protein]
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===May 15, 2014===
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Dennis - [[Media:PNAS-2010-Auclair-21394-9.pdf|Strategies for stabilizing superoxide dismutase (SOD1), the protein destabilized in the most common form of familial amyotrophic lateral sclerosis]]
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===May 1, 2014===
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Ben - [http://www.nature.com/nchembio/journal/v9/n5/full/nchembio.1213.html?WT.ec_id=NCHEMBIO-201305 A single-molecule dissection of ligand binding to a protein with intrinsic dynamics]
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===Apr 18, 2014===
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Eri - [[Media:2013 Shammas Clarke.pdf|Remarkably Fast Coupled Folding and Binding of the Intrinsically Disordered Transactivation Domain of cMyb to CBP KIX]]; [[Media:2013 Shammas Clarke SI.pdf|SI]]
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===Apr 3, 2014===
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Abhi - [[Media:PNAS-2010-Gebhardt-2013-8.pdf|Full distance-resolved folding energy landscape of one single protein molecule]]
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===Mar 13, 2014===
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Eri - [[Media:2013 Das Pappu.pdf|Conformations of intrinsically disordered proteins are influenced by linear sequence distributions of
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oppositely charged residues]]
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===Feb 27, 2014===
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David - [[Media:Cooperative_folding_of_tau.pdf|Cooperative folding of tau peptide by coordination of group IIB metal cations during heparin-induced aggregation]]
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===Feb 13, 2014===
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Abhi - [[Media:Muller-Spath10complete.pdf|Charge interactions can dominate the dimensions of intrinsically disordered proteins]]
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===Feb 4, 2014===
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Eri - [[Media:2010_Carulla_Dobson.pdf|Structure and Intermolecular Dynamics of Aggregates Populated during Amyloid Fibril Formation Studied by Hydrogen/Deuterium Exchange]]
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David - [[Media:Muneeswaran_Biophys_Chem_SOD_Mutants.pdf|Comparative structural and conformational studies on H43R and W32F mutants of copper–zinc superoxide dismutase by molecular dynamics simulation]]
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Abhi - [[Media:Science-2011-Bhabha-234-8.pdf|A Dynamic Knockout Reveals That Conformational Fluctuations Influence the Chemical Step of Enzyme Catalysis]]; [[Media:Bhabha-SOM.pdf|SI]]
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Latest revision as of 20:40, 2 February 2021

Schedule

At 3:00pm on Wednesdays, using [1]:

Feb 3 - video journal club: Michael Woodside, U Alberta

Feb 10 - video journal club, TBD

Feb 17 - Ellie data/practice talk

Feb 24 - Hayli practice talk

Mar 3 - Eleanor practice talk

Mar 10 - video journal club, TBD


Past Journal Clubs